Publikationen | Institut für Medizinische Informatik

MIDL 2021

International Conference on
Medical Imaging with Deep Learning
5. bis 7. Juli 2021

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Oberländer M., Linnebacher M., König A., Bogoevska V., Brodersen C., Kaatz R., Krohn M., Hackmann M., Ingenerf J., Christoph J. et al.
The "North German Tumor Bank of Colorectal Cancer": Status Report after the First 2 Years of Support by the German Cancer Aid Foundation
Langenbeck's archives of surgery / Deutsche Gesellschaft für Chirurgie, 398, 2, 251-8, 2013

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Heinrich M.P., Oktay O.
Accurate Intervertebral Disc Localisation and Segmentation in MRI Using Vantage Point Hough Forests and Multi-atlas Fusion
In: International Workshop on Computational Methods and Clinical Applications for Spine Imaging, Springer, Cham, 77-84, 2016

Oktay O., Ferrante E., Kamnitsas K., Heinrich M.P., Bai W., Caballero J., Cook S.A., de Marvao A., Dawes T., O'Regan D.P. et al.
Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation
IEEE Transactions on Medical Imaging, 37, 2, 384-395, 2018

Werner R., Duscha C., Schmidt-Richberg A., Ehrhardt J., Handels H.
Assessing Accuracy of Non-Linear Registration in 4D Image, Data Using Automatically Detected Landmark Correspondences
In: Ourselin S., Haynor D.R. (eds.), SPIE Medical Imaging 2013, Image Processing, Orlando, USA, 8669-34,0Z1-0Z9, 2013

Schlemper J., Oktay O., Schaap M., Heinrich M.P., Kainz B., Glocker B., Rueckert D.
Attention gated networks: Learning to leverage salient regions in medical images
Medical Image Analysis, 53, 197-207, 2019

Oktay O., Schlemper J., Folgoc L.L., Lee M., Heinrich M.P., Misawa K., Mori K., McDonagh S., Hammerla N.Y., Kainz B. et al.
Attention U-Net: Learning Where to Look for the Pancreas
In: Conference on Medical Imaging with Deep Learning (MIDL 2018), 2018

Tanno R., Makropoulos A., Arslan S., Oktay O., Mischkewitz S., Al-Noor F., Oppenheimer J., Mandegaran R., Kainz B., Heinrich M.P.
AutoDVT: Joint Real-Time Classification for Vein Compressibility Analysis in Deep Vein Thrombosis Ultrasound Diagnostics
In: Medical Image Computing and Computer Assisted Intervention – MICCAI 2018, LNCS, 11071, 905-912, 2018

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Krüger J., Ehrhardt J., Bischof A., Handels H.
Breast Compression Simulation Using ICP-Based B-Spline Deformation for Correspondence Analysis in Mammography and MRI Datasets
In: Ourselin S., Haynor D.R. (eds.), Image Processing, SPIE Medical Imaging 2013, Orlando, USA, SPIE, 8669-48,1D1-1D8, 2013

Basso L., Oehler M., Grzegorzek M.
Breathing Rate Estimation during Sleep using Capacitive ECG Electrodes
In: Buzug T.M., Handels H., Hübner C., Klein S., Mertins A., Rostalski P. (eds.), Student Conference Proceedings 2021: Medical Engineering Science, Medical Informatics, Biomedical Engineering, Auditory Technology, Biophysics and Robotics and Autonomous Systems, Lübeck, Infinite Science Publishing, 211-214, 2021

Heinrich M.P., Oktay O.
BRIEFnet: Deep Pancreas Segmentation Using Binary Sparse Convolutions
In: International Conference on Medical Image Computing and Computer-Assisted Intervention, Springer, Cham, 329-337, 2017

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Löffler B.S., Stecher H.I., Fudickar S., de Sordi D., Otto-Sobotka F., Hein A., Herrmann C.H.
Counteracting the Slowdown of Reaction Times in a Vigilance Experiment with 40-Hz Transcranial Alternating Current Stimulation
IEEE - Transactions on Neural Systems & Rehabilitation Engineering, 2018

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Hackmann M., Habermann J., Oberländer M., Prokosch H.-U., Mate S., Christoph J., Handels H., Ingenerf J.
Datenschutzkonforme IT-Lösung für multizentrische klinische Biobanking-Projekte
In: Stausberg J., Großer A., Haerting J., Knaup P., Plischke M., Timmer A., Haux R. (eds.), 57. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie (GMDS), Braunschweig, ID261,336-338, 2012

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Mollink J., Kleinnijenhuis M., vanvan Walsum A.-M.C., Sotiropoulos S.N., Cottaar M., Mirfin C., Heinrich M.P., Jenkinson M., Pallebage-Gamarallage M., Ansorge O. et al.
Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging
NeuroImage, Academic Press, 157, 561-574, 2017

Carass A., Roy S., Gherman A., Reinhold J.C., Jesson A., Arbel T., Maier O., Handels H., Ghafoorian M., Platel B. et al.
Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis
Scientific Reports, 10, 1, 1-19, 2020

Zhuang X., Li L., Payer C., Štern D., Urschler M., Heinrich M.P., Oster J., Wang C., Smedby Ö., Bian C. et al.
Evaluation of algorithms for Multi-Modality Whole Heart Segmentation: An open-access grand challenge
Medical Image Analysis, 58, 101537, 2019

Xiao Y., Rivaz H., Chabanas M., Fortin M., Machado I., Ou Y., Heinrich M.P., Schnabel J.A., Zhong X., Maier A. et al.
Evaluation of MRI to Ultrasound Registration Methods for Brain Shift Correction: The CuRIOUS2018 Challenge
IEEE Transactions on Medical Imaging, 39, 3, 777-786, 2019

Murphy K., van Ginneken B., Reinhardt J.M., Kabus S., Ding K., Deng X., Cao K., Du K., Christensen G.E., Garcia V. et al.
Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge
IEEE Transactions on Medical Imaging, 30, 11, 1901-1920, 2011

Xu Z., Lee C.P., Heinrich M.P., Modat M., Rueckert D., Ourselin S., Abramson R.G., Landman B.A.
Evaluation of Six Registration Methods for the Human Abdomen on Clinically Acquired CT.
IEEE transactions on bio-medical engineering, 63, 8, 1563-72, 2016

Heinrich M.P., Oktay O.
Exploring Sparsity in CNNs for Medical Image Segmentation BRIEFnet
In: Maier A., Deserno T.M., Handels H., Maier-Hein K.H., Palm C., Tolxdorff T. (eds.), Bildverarbeitung für die Medizin 2018, Erlangen, Informatik aktuell, Springer Vieweg, Berlin Heidelberg, 40-41, 2018

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Ingenerf J., Öczitak E., Gerdsen F., Krüger D., Katalinic G., Pöppl S.J.
FLASH-basierte Lernprogramme für die Aus- und Weiterbildung in Medizinischer Informatik: verschiedene Grade der Wiederverwendbarkeit
In: Pöppl S.J., Bernauer J., Fischer M., Handels H., Klar R., Leven J., Puppe F., Spitzer K. (eds.), 8. Workshop der GMDS-AG "Computergestützte Lehr- und Lernsysteme in der Medizin, Lübeck, Shaker, 57-68, 2004

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Nehrhoff I., Rodríguez López S., Ortuno J.E., Maier O., Ledesma-Carbayo M.J., Handels H.
Image processing of pulmonary radiography of pediatric patients to assess tuberculosis or pneumonia for the application in diagnosis in low- and middle-income countries
In: Buzug T.M., Handels H. (eds.), Student Conference 2016, Medical Engineering Science and Medical Informatics, Lübeck, Infinite Science Publishing, 199-202, 2016

Oehm J., Ulrich H., Simon D., Ingenerf J.
An Investigation on Automated Consolidation for Medical Database Schemata
In: Buzug T.M., Handels H., Klein S. (eds.), Student Conference 2018, Medical Engineering Science, Medical Informatics and Biomediacal Engineering, Lübeck, Infinite Science Publishing, 361-364, 2018

Winzeck S., Hakim A., McKinley R., Pinto J.A.A.D.S.R., Alves V., Silva C., Pisov M., Krivov E., Belyaev M., Monteiro M. et al.
ISLES 2016 and 2017-Benchmarking Ischemic Stroke Lesion Outcome Prediction Based on Multispectral MRI
Frontiers in Neurology, 9, 679, 2018

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Ehrhardt J., Kepp T., Schmidt-Richberg A., Handels H.
Joint Multi-Object Registration and Segmentation of Left and Right Cardiac Ventricles in 4D Cine MRI
In: Ourselin S., Styner M.A. (eds.), SPIE Medical Imaging 2014, Image Processing, San Diego, USA, 9034, 90340M, 2014

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Ortmüller J., Wilms M., Werner R., Handels H.
Kombination von Atemsignalen zur Optimierung der Prädiktion komplexer atmungsbedingter Organ- und Tumorbewegungen
In: Deserno T.M., Handels H., Meinzer H.-P., Tolxdorff T. (eds.), Bildverarbeitung für die Medizin 2014, Aachen, Informatik aktuell, Springer, Berlin Heidelberg, 72-77, 2014

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Carass A., Roy S., Jog A., Cuzzocreo J.L., Magrath E., Gherman A., Button J., Nguyen J., Prados F., Sudre C.H. et al.
Longitudinal multiple sclerosis lesion segmentation: Resource and challenge
NeuroImage, 148, 77-102, 2017

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Ohlsen T., Kruse V., Krupar R., Banach A., Ingenerf J., Drenkhahn C.M.
Mapping of ICD-O tuples to OncoTree codes using SNOMED CT post-coordination
Medical Informatics Europe, 294, 307--311, 2022

Ohlsen T., Drenkhahn C.M., Kruse V., Banach A., Ingenerf J.
Mapping von ICD-O-Tupeln auf den OncoTree durch die Verwendung von SNOMED CT-Postkoordination
In: 16. DVMD-Fachtagung, Leipzig, 2022

Malterer S., Ehrhardt J., Frydrychowicz A., Oechtering T., Handels H.
Measurement ans Analysis of the repiration-driven Motion of the Pulmonary Artery
In: Buzug T.M., Birngruber R., Brinkmann R., Gehring H., Gutsmann T., Handels H., Heinrich M.P., et al (eds.), Student Conference 2015, Medical Engineering Science, Lübeck, 131-134, 2015

Kock-Schoppenhauer A.-K., Schreiweis B., Ulrich H., Reimer N., Wiedekopf J., Kinast B., Busch H., Bergh B., Ingenerf J.
Medical Data Engineering – Theory and Practice
In: Bellatreche L., Chernishev G., Corral A., Ouchani S., Vain J. (eds.), Advances in Model and Data Engineering in the Digitalization Era. MEDI 2021, Communications in Computer and Information Science, Springer, Cham, 1481, 2021

Wilms M., Ha I.Y., Handels H., Heinrich M.P.
Model-based Regularisation for Respiratory Motion Estimation with Sparse Features in Image-guided Interventions
In: Ourselin S., Joskowicz L., Sabuncu M.R., Unal G., Wells W. (eds.), 19th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) 2016, Athen, Image Processing, Computer Vision, Pattern Recognition, and Graphics, Springer International Publishing, 9902, 89-97, 2016

Heinrich M.P., Oster J.
MRI Whole Heart Segmentation using Discrete Nonlinear Registration and Fast Non-Local Fusion
In: International Workshop on Statistical Atlases and Computational Modeling of the Heart, Springer, Cham, 233-241, 2017

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Heinrich M.P., Papiez B.W., Schnabel J., Handels H.
Non-Parametric Discrete Registration with Convex Optimisation
In: Ourselin S., Modat M. (eds.), Biomedical Image Registration, WBIR 2014, London, Springer, Berlin, LNCS 8545, 51-61, 2014

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Heinrich M.P., Oktay O., Bouteldja N.
OBELISK – One Kernel to Solve Nearly Everything:Unified 3D Binary Convolutions for Image Analysis
In: Conference on Medical Imaging with Deep Learning (MIDL 2018), 2018

Heinrich M.P., Oktay O., Bouteldja N.
OBELISK-Net: Fewer layers to solve 3D multi-organ segmentation with sparse deformable convolutions
Medical Image Analysis, 54, 1-9, 2019

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Simon F., Kock-Schoppenhauer A.-K., Ulrich H., Oberländer M., Maushagen R., Flügge F., Ingenerf J.
Provision of sensitive clinical and biobank data for research in compliance with data protection regulations
In: Buzug T.M., Handels H., Hübner C., Klein S., Mertins A., Rostalski P. (eds.), Student Conference Proceedings 2021: Medical Engineering Science, Medical Informatics, Biomedical Engineering, Auditory Technology, Biophysics and Robotics and Autonomous Systems, Lübeck, Infinite Science Publishing, 133-136, 2021

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Färber M., Handels H., Grünendick T., Rick A., Orlikov A., Pöppl S.J.
Rekonstruktion des Oberflächenreliefs pigmentierter Hautmale durch photometrisches Stereo
In: Tolxdorff T., et al (eds.), Bildverarbeitung für die Medizin 2004: Algorithmen - Systeme - Anwendungen, Berlin, Informatik aktuell, Springer-Verlag, 135-139, 2004

Ortmüller J., Werner R., Wilms M., Handels H., Gauer T.
Repiratory Surface Motion Measurement by Microsoft Kinect: Implementation and Evaluation of a clinical Setup
In: Buzug T.M., Birngruber R., Brinkmann R., Gehring H., Gutsmann T., Handels H., Heinrich M.P., et al (eds.), Student Conference 2015, Medical Engineering Science, Lübeck, 135-138, 2015

Ortmüller J., Gauer T., Wilms M., Handels H., Werner R.
Respiratory Surface Motion Measurement by Microsoft Kinect: Implementation and Evaluation of a Clinical Setup
Current Directions in Biomedical Engineering, 1, 1, 270-273, 2015

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Stein A., Otte K., Röhling H.M., Li F., Nisar M.A., Grzegorzek M.
Segmentation of infants in depth data: Evaluation of thresholding approaches
In: Buzug T.M., Handels H., Klein S., Hübner C., Mertins A., Rostalski P. (eds.), Student Conference Proceedings 2022: Medical Engineering Science, Medical Informatics, Biomedical Engineering, Auditory Technology, Biophysics and Robotics and Autonomous Systems, Lübeck, Infinite Science Publishing, 307-310, 2022

Wilms M., Werner R., Blendowski M., Ortmüller J., Handels H.
Simulation of Range Imaging-Based Estimation of Respiratory Lung Motion: Influence of Noise, Signal Dimensionality and Sampling Patterns
Methods of Information in Medicine, 53, 4, 257-263, 2014

Ehrhardt J., Krüger J., Handels H.
Statistical Shape and Appearance Models without One-to-One Correspondences
In: Ourselin S., Styner M.A. (eds.), SPIE Medical Imaging 2014, Image Processing, San Diego, USA, 9034, 90340U, 2014

Suinesiaputra A., Ablin P., Alba X., Alessandrini M., Allen J., Bai W., Cimen S., Claes P., Cowan B.R., D'hooge J. et al.
Statistical shape modeling of the left ventricle: myocardial infarct classification challenge.
IEEE journal of biomedical and health informatics, 22, 2, 503-515, 2018

Oktay O., Bai W., Guerrero R., Rajchl M., de Marvao A., O’Regan D.P., Cook S.A., Heinrich M.P., Glocker B., Rueckert D.
Stratified Decision Forests for Accurate Anatomical Landmark Localization in Cardiac Images
IEEE Transactions on Medical Imaging, IEEE, 36, 1, 332-342, 2017

Oktay O., Schuh A., Rajchl M., Keraudren K., Gomez A., Heinrich M.P., Penney G., Rueckert D.
Structured Decision Forests For Multi-modal Ultrasound Image Registration
In: Navab N., Hornegger J., Wells W., Frangi A.F. (eds.), 18th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015, Munich, Lecture Notes in Computer Science, Springer, Berlin, LNCS Vol. 9350, 363-371, 2015

Buzug T.M., Handels H. (eds.)
Student Conference Proceedings 2017: 6th Conference on Medical Engineering Science and 2nd Conference on Medical Informatics
Infinite Science Publishing, Lübeck, 2017

Buzug T.M., Handels H., Klein S. (eds.)
Student Conference Proceedings 2018: 7th Conference on Medical Engineering Science and 3rd Conference on Medical Informatics and 1st Conference on Biomedical Engineering
Infinite Science Publishing, Lübeck, 2018

Buzug T.M., Handels H., Klein S., Mertins A. (eds.)
Student Conference Proceedings 2019: 8th Conference on Medical Engineering Science and 4th Conference on Medical Informatics and 2nd Conference on Biomedical Engineering and 1st Conference on Auditory Technology
Infinite Science Publishing, Lübeck, 2019

Buzug T.M., Handels H., Klein S., Mertins A. (eds.)
Student Conference Proceedings 2020: 9th Conference on Medical Engineering Science and 5th Conference on Medical Informatics and 3rd Conference on Biomedical Engineering and 2nd Conference on Auditory Technology
Infinite Science Publishing, Lübeck, 2020

Buzug T.M., Handels H., Klein S., Hübner C., Mertins A., Rostalski P. (eds.)
Student Conference Proceedings 2021: 10th C. on Medical Engineering Science and 6th C. on Medical Informatics and 4th C. on Biomedical Engineering and 3rd C. on Auditory Technology and 1st C. on Biophysics and 1st C. on Robotics and Autonomous Systems
Infinite Science Publishing, Lübeck, 2021

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