MIDL 2021

 
International Conference on
Medical Imaging with Deep Learning
5. bis 7. Juli 2021

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In Press
Fleitmann M., Uzunova H., Stroth A.M., Gerlach J., Fürschke A., Barkhausen J., Bischof A., Handels H.
Deep-Learning-based Feature Encoding of Clinical Parameters for Patient Specific CTA Dose Optimization
In: International Conference on Wireless Mobile Communication and Healthcare, In Press
Kock-Schoppenhauer A.-K., Schreiweis B., Ulrich H., Reimer N., Wiedekopf J., Kinast B., Busch H., Bergh B., Ingenerf J.
Medical Data Engineering – Theory and Practice
Communications in Computer and Information Science, In Press
Löbe M., Ulrich H., Beger C., Bender T., Bauer C., Sax U., Ingenerf J., Winter A.
Improving Findability of Digital Assets in Research Data Repositories Using the W3C DCAT Vocabulary
Studies in Health Technology and Informatics, In Press
Siebert H., Rajamani K.T., Heinrich M.P.
Learning inverse consistent 3D groupwise registration with deforming autoencoders
In: SPIE Medical Imaging 2021, In Press
Ulrich H., Behrend P., Wiedekopf J., Drenkhahn C.M., Kock-Schoppenhauer A.-K., Ingenerf J.
Hands on the Medical Informatics Initiative Core Data Sets - Lessons Learned from Converting the MIMIC-IV
Studies in Health Technology and Informatics, In Press
Wiedekopf J., Ulrich H., Drenkhahn C.M., Kock-Schoppenhauer A.-K., Ingenerf J.
TermiCron – Bridging the Gap between FHIR Terminology Servers and Metadata Repositories
Studies in Health Technology and Informatics, In Press
2021
Ablaß T., Ulrich H., Kock-Schoppenhauer A.-K., Simon F., Wagenzink S., Maushagen R., Habermann J.K., Ingenerf J.
Konzeption und Implementierung einer Geräteschnittstelle des TECAN EVO Aliquotierroboter im Biobankkontext
GMS Medizinische Informatik, Biometrie und Epidemiologie, 2021
Alvi H.M.U.H., Farid M.S., Khan M.H., Grzegorzek M.
Quality Assessment of 3D Synthesized Images Based on Textural and Structural Distortion Estimation
Applied Sciences, MDPI, 11, 6, 2666, 2021
Amjad F., Khan M.H., Nisar M.A., Farid M.S., Grzegorzek M.
A Comparative Study of Feature Selection Approaches for Human Activity Recognition Using Multimodal Sensory Data
Sensors, MDPI, 21, 7, 2368, 2021
Andresen J., Kepp T., Ehrhardt J., von der Burchard C., Roider J., Handels H.
CNN-based joint non-correspondence detection and registration of retinal optical coherence tomography images
In: CARS 2021: Computer Assisted Radiology and Surgery Proceedings of the 35th International Congress and Exhibition, June 21-25, 2021, Munich, Germany, International Journal of Computer Assisted Radiology and Surgery, 16, 1-119, 2021
Andresen J., Uzunova H., Ehrhardt J., Handels H.
New Multiple Sclerosis Lesion Detection with Convolutional Neural Registration Networks
In: Commowick O., Cervenansky F., Cotton F., Dojat M. (eds.), Proceedings of the 2nd MICCAI challenge on multiple sclerosis new lesions segmentation challenge using a data management and processing infrastructure — MICCAI-MSSEG-2, 111-114, 2021
Banach A., Ulrich H., Kroll B., Kiel A., Ingenerf J., Kock-Schoppenhauer A.-K.
APERITIF – Automatic Patient Recruiting for Clinical Trials Based on HL7 FHIR
Studies in Health Technology and Informatics, 281, 58-62, 2021
Banach A., Kock-Schoppenhauer A.-K., Ulrich H., Ingenerf J.
The Automatic Evaluation of Metadata in Healthcare
GMS Medizinische Informatik, Biometrie und Epidemiologie, 2021
Barkow L., Meincke O., Ulrich H., Ingenerf J.
Fit for Purpose: Analyzing the Loss of Data integrating the Archiving and Exchange Interface for Medical Practice Management Systems
Studies in Health Technology and Informatics, 278, 80-85, 2021
Bigalke A., Hansen L., Heinrich M.P.
End-to-end learning of body weight prediction from point clouds with basis point sets
In: Palm C., Deserno T.M., Handels H., Maier A., Maier-Hein K.H., Tolxdorff T. (eds.), Bildverarbeitung für die Medizin 2021, Regensburg, Informatik aktuell, Springer Vieweg, Wiesbaden, 254-259, 2021
Blendowski M., Hansen L., Heinrich M.P.
Weakly-supervised learning of multi-modal features for regularised iterative descent in 3D image registration
Medical Image Analysis, 67, 101822, 2021
Drenkhahn C.M., Ulrich H., Ingenerf J.
An ontology-based tool to visually compare LOINC subsets
GMS Medizinische Informatik, Biometrie und Epidemiologie, 2021
Drenkhahn C.M., Burmester S., Ballout S., Ulrich H., Wiedekopf J., Ingenerf J.
Using FHIR terminology services-based tools for mapping of local microbiological pathogen terms to SNOMED CT at a German university hospital
In: 16. DVMD-Fachtagung 2021, Leipzig, 2021
Fleitmann M., Uzunova H., Stroth A.M., Gerlach J., Fürschke A., Barkhausen J., Bischof A., Handels H.
Deep-Learning-Based Feature Encoding of Clinical Parameters for Patient Specific CTA Dose Optimization
In: International Conference on Wireless Mobile Communication and Healthcare, Springer, 315-322, 2021
Hansen L., Heinrich M.P.
Probabilistic Dense Displacement Networks for Medical Image Registration - Contributions to the Learn2Reg challenge
In: Palm C., Deserno T.M., Handels H., Maier A., Maier-Hein K.H., Tolxdorff T. (eds.), Bildverarbeitung für die Medizin 2021, Regensburg, Informatik aktuell, Springer Vieweg, Wiesbaden, 125-126, 2021
Hoffmann R., Brodowski H., Steinhage A., Grzegorzek M.
Detecting Walking Challenges in Gait Patterns Using a Capacitive Sensor Floor and Recurrent Neural Networks
Sensors, MDPI, 21, 4, 1086, 2021
Huttmann G., Wunderlich M., Koch P., Sudkamp H., Theisen-Kunde D., Kepp T., Handels H., von der Burchard C., Roider J.
Improved SELFF-OCT using motion correction and artifact detection
Investigative Ophthalmology & Visual Science, 62, 8, 2527, 2021
Ilyas A., Farid M.S., Khan M.H., Grzegorzek M.
Exploiting Superpixels for Multi-Focus Image Fusion
Entropy, MDPI, 23, 2, 2021
Wulff A., Baier C., Ballout S., Tute E., Sommer K.K., Kaase M., Sargeant A., Drenkhahn C.M., Schlüter D., Marschollek M. et al.
Transformation of microbiology data into a standardised data representation using OpenEHR
Scientific Reports, 11, 10556, 2021
Kruse C., Hansen L., Heinrich M.P.
Multi-modal Unsupervised Domain Adaptation for Deformable Registration Based on Maximum Classifier Discrepancy
In: Palm C., Deserno T.M., Handels H., Maier A., Maier-Hein K.H., Tolxdorff T. (eds.), Bildverarbeitung für die Medizin 2021, Regensburg, Informatik aktuell, Springer Vieweg, Wiesbaden, 192-197, 2021
Maqsood A., Farid M.S., Khan M.H., Grzegorzek M.
Deep Malaria Parasite Detection in Thin Blood Smear Microscopic Images
Applied Sciences, MDPI, 114, 5, 2284, 2021
Palm C., Deserno T.M., Handels H., Maier A., Maier-Hein K.H., Tolxdorff T. (eds.)
Bildverarbeitung für die Medizin 2021
Springer Vieweg, Berlin Heidelberg, Regensburg, 2021
Rajput A.-M., Drenkhahn C.M.
Perspectives and Obstacles for Transforming Terminologies into FHIR CodeSystems Exemplified by Alpha-ID
Studies in Health Technology and Informatics, 281, 213-217, 2021
Reimer N., Unberath P., Busch H., Ingenerf J.
FhirSpark – Implementing a mediation layer to bring FHIR to the cBioPortal for Cancer Genomics
Studies in Health Technology and Informatics, 281, 303-307, 2021
Reimer N., Ulrich H., Busch H., Kock-Schoppenhauer A.-K., Ingenerf J.
openEHR Mapper – A Tool to Fusion Clinical and Genomic Data using the openEHR standard
Studies in Health Technology and Informatics, 278, 86-93, 2021
Riech K., Ulrich H., Ingenerf J., Andersen B.
Mapping of Medical Device Data from IEEE 11073-10207 to HL7 FHIR
GMS Medizinische Informatik, Biometrie und Epidemiologie, 17, 2, 2021
Schumacher M., Frey D., Ha I.Y., Genz A., Bade R., Heinrich M.P.
Semantically Guided 3D Abdominal Image Registration with Deep Pyramid Feature Learning
In: Palm C., Deserno T.M., Handels H., Maier A., Maier-Hein K.H., Tolxdorff T. (eds.), Bildverarbeitung für die Medizin 2021, Regensburg, Informatik aktuell, Springer Vieweg, Wiesbaden, 16-21, 2021
Siebert H., Hansen L., Heinrich M.P.
Evaluating Design Choices for Deep Learning Registration Networks - Architecture Matters
In: Palm C., Deserno T.M., Handels H., Maier A., Maier-Hein K.H., Tolxdorff T. (eds.), Bildverarbeitung für die Medizin 2021, Regensburg, Informatik aktuell, Springer Vieweg, Wiesbaden, 111-116, 2021
Strenge P., Lange B., Grill C., Draxinger W., Danicke V., Theisen-Kunde D., Handels H., Bonsanto M.M., Hagel C., Huber R. et al.
Characterization of brain tumor tissue with 1310 nm optical coherence tomography
In: Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXV, Online Only, United States, International Society for Optics and Photonics, 11630, 116301T, 2021
Strenge P., Lange B., Grill C., Draxinger W., Danicke V., Theisen-Kunde D., Handels H., Hagel C., Bonsanto M.M., Huber R. et al.
Creating a depth-resolved OCT-dataset for supervised classification based on ex vivo human brain samples
In: Optical Coherence Tomography and Coherence Domain Optical Methods in Biomedicine XXV, Online Only, United States, International Society for Optics and Photonics, 11630, 116301S, 2021
Uzunova H., Handels H., Ehrhardt J.
Guided Filter Regularization for Improved Disentanglement of Shape and Appearance in Diffeomorphic Autoencoders
In: Medical Imaging with Deep Learning, 2021
Wiedekopf J., Ulrich H., Essenwanger A., Kiel A., Kock-Schoppenhauer A.-K., Ingenerf J.
Desiderata for a Synthetic Clinical Data Generator - Requirements from an International Perspective
Studies in Health Technology and Informatics, 281, 68-72, 2021
Wiedekopf J., Drenkhahn C.M., Ulrich H., Kock-Schoppenhauer A.-K., Ingenerf J.
Providing ART-DECOR ValueSets via FHIR Terminology Servers – A Technical Report
Studies in Health Technology and Informatics, 283, 127-135, 2021
Zhang J., Li C., Kosov S., Grzegorzek M., Shirahama K., Jiang T., Sun C., Li Z., Li H.
LCU-Net: A novel low-cost U-Net for environmental microorganism image segmentation
Pattern Recognition, Elsevier, 115, 2021
2020
Andersen B., Kasparick M., Riech K., Klöckner S., Keller A., Mündermann L., Maier-Holzberg J., Timmermann D., Ingenerf J.
Service-Oriented Medical Device Connectivity: Particular Standards for Endoscopic Surgery
In: 2020 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), Montreal, QC, Canada, IEEE, 5649-5652, 2020
Banach A., Kock-Schoppenhauer A.-K., Ulrich H., Ingenerf J.
MetaCheck – a Web Application for the Automatic Evaluation of Metadata in Healthcare
In: Buzug T.M., Handels H., Klein S., Mertins A. (eds.), Student Conference 2020, Medical Engineering Science, Medical Informatics, Biomedical Engineering and Auditory Technology, Lübeck, Infinite Science Publishing, 143-146, 2020
Barkow L., Meincke O., Ulrich H., Ingenerf J.
Analysis of Data Loss when using the Archiving and Exchange Interface for Practice Management Systems
In: Buzug T.M., Handels H., Klein S., Mertins A. (eds.), Student Conference 2020, Medical Engineering Science, Medical Informatics, Biomedical Engineering and Auditory Technology, Lübeck, Infinite Science Publishing, 123-126, 2020
Bartram L., Dedersen B., Heinrich M.P.
Development of a Deep Learning based classification of respirator masks for a mobile application
In: Buzug T.M., Handels H., Klein S., Mertins A. (eds.), Student Conference 2020, Medical Engineering Science, Medical Informatics, Biomedical Engineering and Auditory Technology, Lübeck, Infinite Science Publishing, 193-196, 2020
Blendowski M., Heinrich M.P.
Learning to map between ferns with differentiable binary embedding networks
In: International Conference on Medical Imaging with Deep Learning, PMLR, 2020
Blendowski M., Bouteldja N., Heinrich M.P.
Multimodal 3D medical image registration guided by shape encoder–decoder networks
International Journal of Computer Assisted Radiology and Surgery, 15, 269-276, 2020
Blendowski M., Heinrich M.P.
Self-Supervised 3D Context Feature Learning on Unlabeled Volume Data
In: Tolxdorff T., Deserno T.M., Handels H., Maier A., Maier-Hein K.H., Palm C. (eds.), Bildverarbeitung für die Medizin 2020, Berlin, Informatik aktuell, Springer Vieweg, Wiesbaden, 192, 2020
Boudnik L., Hochreiter J., Müllegger G., Heinrich M.P.
Removal of ECG artifacts caused by mechanical CPR using externally recorded compression markers
In: Buzug T.M., Handels H., Klein S., Mertins A. (eds.), Student Conference 2020, Medical Engineering Science, Medical Informatics, Biomedical Engineering and Auditory Technology, Lübeck, Infinite Science Publishing, 323-326, 2020
Buzug T.M., Handels H., Klein S., Mertins A. (eds.)
Student Conference Proceedings 2020: 9th Conference on Medical Engineering Science and 5th Conference on Medical Informatics and 3rd Conference on Biomedical Engineering and 2nd Conference on Auditory Technology
Infinite Science Publishing, Lübeck, 2020
Carass A., Roy S., Gherman A., Reinhold J.C., Jesson A., Arbel T., Maier O., Handels H., Ghafoorian M., Platel B. et al.
Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis
Scientific Reports, 10, 1, 1-19, 2020
Drenkhahn C.M., Ingenerf J.
The LOINC Content Model and Its Limitations of Usage in the Laboratory Domain
Studies in Health Technology and Informatics, 270, 437-442, 2020

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